Curated Optogenetic Publication Database

Search precisely and efficiently by using the advantage of the hand-assigned publication tags that allow you to search for papers involving a specific trait, e.g. a particular optogenetic switch or a host organism.

Showing 1 - 3 of 3 results
1.

Optogenetic dissection of the roles of actomyosin in the mechanics underlying tissue fluidity.

blue CRY2/CIB1 D. melanogaster in vivo Signaling cascade control Control of cytoskeleton / cell motility / cell shape
bioRxiv, 8 Nov 2021 DOI: 10.1101/2021.11.07.467642 Link to full text
Abstract: Rapid epithelial tissue flows are essential to building and shaping developing embryos. However, it is not well understood how the mechanical properties of tissues and the forces driving them to flow are jointly regulated to accommodate rapid tissue remodeling. To dissect the roles of actomyosin in the mechanics of epithelial tissue flows, here we use two optogenetic tools, optoGEF and optoGAP, to manipulate Rho/Rho-kinase signaling and actomyosin contractility in the germband epithelium, which flows via convergent extension during Drosophila body axis elongation. The ability to perturb actomyosin across the tissue allows us to analyze the effects of actomyosin on cell rearrangements, tissue tensions, and tissue mechanical properties. We find that either optogenetic activation or deactivation of Rho1 signaling and actomyosin contractility at the apical surface of the germband disrupts cell rearrangements and tissue-level flows. By probing mechanical tensions in the tissue using laser ablation and predicting tissue mechanical properties from cell packings, we find that actomyosin influences both the anisotropic forces driving tissue flow and the mechanical properties of the tissue resisting flow, leading to complex relationships between actomyosin activity and tissue-level flow. Moreover, our results indicate that changes in the distribution of medial and junctional myosin in the different perturbations alter tissue tension and cell packings in distinct ways, revealing how junctional and medial myosin have differential roles in promoting and orienting cell rearrangements to tune tissue flows in developing embryos.
2.

Using optogenetics to link myosin patterns to contractile cell behaviors during convergent extension.

blue CRY2/CIB1 D. melanogaster in vivo Control of cytoskeleton / cell motility / cell shape
Biophys J, 20 Jul 2021 DOI: 10.1016/j.bpj.2021.06.041 Link to full text
Abstract: Distinct patterns of actomyosin contractility are often associated with particular epithelial tissue shape changes during development. For example, a planar-polarized pattern of myosin II localization regulated by Rho1 signaling during Drosophila body axis elongation is thought to drive cell behaviors that contribute to convergent extension. However, it is not well understood how specific aspects of a myosin pattern influence the multiple cell behaviors, including cell intercalation, cell shape changes, and apical cell area fluctuations, that simultaneously occur during morphogenesis. Here, we developed two optogenetic tools, optoGEF and optoGAP, to activate or deactivate Rho1 signaling, respectively. We used these tools to manipulate myosin patterns at the apical side of the germband epithelium during Drosophila axis elongation and analyzed the effects on contractile cell behaviors. We show that uniform activation or inactivation of Rho1 signaling across the apical surface of the germband is sufficient to disrupt the planar-polarized pattern of myosin at cell junctions on the timescale of 3-5 min, leading to distinct changes in junctional and medial myosin patterns in optoGEF and optoGAP embryos. These two perturbations to Rho1 activity both disrupt axis elongation and cell intercalation but have distinct effects on cell area fluctuations and cell packings that are linked with changes in the medial and junctional myosin pools. These studies demonstrate that acute optogenetic perturbations to Rho1 activity are sufficient to rapidly override the endogenous planar-polarized myosin pattern in the germband during axis elongation. Moreover, our results reveal that the levels of Rho1 activity and the balance between medial and junctional myosin play key roles not only in organizing the cell rearrangements that are known to directly contribute to axis elongation but also in regulating cell area fluctuations and cell packings, which have been proposed to be important factors influencing the mechanics of tissue deformation and flow.
3.

Manipulating the Patterns of Mechanical Forces That Shape Multicellular Tissues.

blue Cryptochromes LOV domains Review
Physiology (Bethesda), 1 Nov 2019 DOI: 10.1152/physiol.00018.2019 Link to full text
Abstract: During embryonic development, spatial and temporal patterns of mechanical forces help to transform unstructured groups of cells into complex, functional tissue architectures. Here, we review emerging approaches to manipulate these patterns of forces to investigate the mechanical mechanisms that shape multicellular tissues, with a focus on recent experimental studies of epithelial tissue sheets in the embryo of the model organism Drosophila melanogaster.
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